BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H02SP1|AL425029
(969 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1525 0.0
>3x_Contig1373
Length = 6197
Score = 1525 bits (756), Expect = 0.0
Identities = 823/862 (95%)
Strand = Plus / Plus
Query: 1 gatcttgtattaacaagattaamgtatgaatataccgtatttatatawacataaamwgaa 60
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||
Sbjct: 5336 gatcttgtattaacaagattaacgtatgaatataccgtatttatatatacataaactgaa 5395
Query: 61 ttgaaaagttggatgtaaaattacaaggcttggmatttgcttaaccaataaactcttttg 120
|||||||||||| ||| | |||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 5396 ttgaaaagttggttgtcatattacatggcttggcctttgcttaaccaataatctcttttg 5455
Query: 121 gtctgtwtgtmtacaagttgcatttacggatcagagtwcgaatcgtcactggcaccattt 180
|||||| ||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5456 gtctgtttgtctactagttgcattttcggatcagagttcgaatcgtcactggcaccattt 5515
Query: 181 tcatcttcwataaggdttatcactggtgtactcgcttcttctttggtatcmttgtvattt 240
|||||||| |||||| ||||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 5516 tcatcttctataaggtttatcactggtgttctcgcttcttctttggtatccttgtcattt 5575
Query: 241 tcatcattgttttcttccggcaagcccatgtaatcatctacggaaggtttactaggatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5576 tcatcattgttttcttccggcaagcccatgtaatcatctacggaaggtttactaggatca 5635
Query: 301 taatcatcttcttgttcggatggttcgtcattaacaawaattgcctcagtcggatcawaa 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 5636 taatcatcttcttgttcggatggttcgtcattaacaataattgcctcagtcggatcataa 5695
Query: 361 ttatcttcttcgacctcttgtaccctctcagtattttctttgagctgttgcttctttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5696 ttatcttcttcgacctcttgtaccctctcagtattttctttgagctgttgcttctttctc 5755
Query: 421 ttttcccttctcttctcttttctttccttcttttctttacwcttgtccttcttagtcttt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5756 ttttcccttctcttctcttttctttccttcttttctttactcttgtccttcttagtcttt 5815
Query: 481 ttagttggaggttcctgcacctggdagawttcttcttcagcttcaatatcacwaaaawcg 540
|||||||||||||||||||||||| ||| ||||||||||||||||||||||| || | ||
Sbjct: 5816 ttagttggaggttcctgcacctggtagatttcttcttcagcttcaatatcactaatatcg 5875
Query: 541 gtgaataaatcatcatggactatactacccctcttgttatggtattwctcgttctcctgg 600
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 5876 gtgaataaatcatcatggactattctacccctcttgttatggtatttctcgttctcctgg 5935
Query: 601 atggcttcattgataaccagawcwctttcgtcgttgaaatcwctttttgttcccttgtac 660
||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct: 5936 atggcttcattgataaccagatctctttcgtcgttgaaatctctttttgttcccttgtac 5995
Query: 661 ttgadcacattacacaatatackacatccaatccgatctttgaaagtagcagaatccaat 720
|||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 5996 ttgatcacattacccaatatactacttccaatccgatctttgaaagtagcagaatccaat 6055
Query: 721 tcgaagcatctattggccagtaaatcaaacgcaccggcaaatcccttcttgatatctctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6056 tcgaagcatctattggccagtaaatcaaacgcaccggcaaatcccttcttgatatttctt 6115
Query: 781 aagttaaaggaacctctactgatattattggaaggatctccaggatcttgaatcaagagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6116 aagttaaaggaacctctactgatattattggaaggatctccaggatcttgaatcaagagc 6175
Query: 841 gaaaagcgcggccttccagcag 862
||||||||||||||||||||||
Sbjct: 6176 gaaaagcgcggccttccagcag 6197
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7283
Number of Sequences: 1807
Number of extensions: 7283
Number of successful extensions: 194
Number of sequences better than 1.0e-20: 1
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)